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  5. Profiling Circular RNA Expression Across 11 Tissues in the Marine Gastropod Rapana venosa
 
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Profiling Circular RNA Expression Across 11 Tissues in the Marine Gastropod Rapana venosa

Author(s)
Hong, Mingwei  
Huang, Zixia  
Uri
http://hdl.handle.net/10197/27139
Date Issued
2024-10-07
Date Available
2024-11-15T16:55:46Z
Abstract
The carnivorous marine gastropod, <jats:italic>Rapana venosa</jats:italic>, also known as the veined rapa whelk, has recently gained considerable attention due to its dual significance as both a valuable commercial seafood resource and a biological invader with widespread ecological implications. Significant efforts have been made to investigate the molecular pathways governing the specific adaptations in <jats:italic>R. venosa</jats:italic>. However, the regulatory mechanisms of these pathways remain largely unclear. Circular RNA (circRNA), a newly‐recognized class of non‐coding molecules, plays crucial roles in post‐transcriptional regulation, impacting various fundamental bioprocesses including development, cell cycle, immunity and disease pathogenesis. In this study, we conducted a comprehensive genome wide profiling of circRNAs across 11 tissues of <jats:italic>R. venosa</jats:italic>. We identified a total of 1214 circRNA genes across tissues, with 640 regarded as high‐confidence candidates. circRNAs displayed overall low expression levels, diverse isoform types and dynamic expression patterns across various tissues. Our comparative analyses revealed a few circRNA genes with a great diversity of isoforms and abundant expression in the salivary gland, suggesting potential roles in the feeding process of <jats:italic>R. venosa</jats:italic>. Furthermore, Gene Ontology (GO) enrichment analysis indicated the potential involvement of commonly expressed circRNAs in fundamental cellular processes, including cell division, amide biosynthesis and cellular response to hormone stimuli. Our study describes a preliminary examination of circRNAs across various tissues of <jats:italic>R. venosa</jats:italic>, offering a foundation for future research into the molecular mechanisms that influence the biology, ecology and behaviour of marine gastropods.
Sponsorship
Irish Research Council
Type of Material
Journal Article
Publisher
Wiley
Journal
Aquaculture Research
Volume
2024
Issue
1
Copyright (Published Version)
2024 the Authors
Subjects

CircRNA profiling

Gene regulation

Marine gastropod

Rapana venosa

RNA-seq

DOI
10.1155/2024/4118218
Language
English
Status of Item
Peer reviewed
ISSN
1355-557X
This item is made available under a Creative Commons License
https://creativecommons.org/licenses/by/3.0/ie/
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Hong et al AquaRes.pdf

Size

1.79 MB

Format

Adobe PDF

Checksum (MD5)

84a2968887cd9d9f96c4836a5e108f77

Owning collection
Biology & Environmental Science Research Collection

Item descriptive metadata is released under a CC-0 (public domain) license: https://creativecommons.org/public-domain/cc0/.
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