Role of Genomics and RNA-seq in Studies of Fungal Virulence
|Title:||Role of Genomics and RNA-seq in Studies of Fungal Virulence||Authors:||Riccombeni, Alessandro
|Permanent link:||http://hdl.handle.net/10197/3865||Date:||Dec-2012||Online since:||2013-12-31T04:00:07Z||Abstract:||Since its introduction in the last decade, massive parallel sequencing, or “next-generation sequencing”, has revolutionized our access to genomic information, providing accurate data with increasingly higher yields and lower costs with respect to first-generation technology. Massive parallel sequencing of cDNA, or RNA-seq, is progressively replacing array-based technology as the method of choice for transcriptomics. This review describes some of the most recent applications of next-generation sequencing technology to the study of pathogenic fungi, including Candida, Aspergillus and Cryptococcus species. Several integrated approaches illustrate the power and accuracy of RNA-seq for studying the biology of human fungal pathogens. In addition, the lack of consistency in data analysis is discussed.||Type of material:||Journal Article||Publisher:||Springer||Journal:||Current Fungal Infection Reports||Volume:||6||Issue:||4||Start page:||297||End page:||274||Copyright (published version):||2012 Springer Science+Business Media||Keywords:||Aspergillus; Bioinformatics; Candida; ChIP-seq; Cryptococcus; Dermatophytes; Genomics; Next-generation sequencing; RNA-seq||Subject LCSH:||Aspergillus
|DOI:||10.1007/s12281-012-0104-z||Language:||en||Status of Item:||Not peer reviewed|
|Appears in Collections:||Biomolecular and Biomedical Science Research Collection|
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