Institute of Food and Health Research Collection

The suitability of face recognition was investigated as a biometric-based identifier for sheep using a holistic analysis of face images by the independent components technique. Algorithm training was performed independently on several normalized face images from 50 sheep (sets of two, three, and four training images per sheep). The performance of this technique was assessed on a separate set of images (three normalized face images per sheep) using the cosine distance classifier. When 180 to 200 components were extracted, the recognition rate was as high as 95.3% to 96%. As expected, fewer independent components reduced the recognition rate, while a higher number of training images per sheep improved it. Although our results have demonstrated the potential of face recognition as a non-invasive, inexpensive, and accurate novel biometric identifier of sheep, further work should aim at improving recognition rates on a larger set of sheep faces.

Since the 1970s, decision support systems (DSS) have become popular as computer technology has developed. A DSS aims to support the solving of specific problems with both human and computer techniques. The purpose of this research was to design and develop a DSS for application to cost and revenue calculations of contracted timber haulage in Ireland. The DSS allows the costs and revenue of timber haulage to be calculated on a daily basis and on a route-specific basis. This implies that the user interface allows certain criteria to be selected, such as truck configuration, truck model, engine size, horsepower, and design gross vehicle weight. Both the revenue and running costs are directly related to the payload weight and the distance traveled. To generate the routes traveled and provide a sophisticated interface for spatial road map information, a Geographic Information System (GIS) was used; ESRI's ArcView 8.3 provides its own application programming in the form of Visual Basic for Applications (VBA).

Apples are an inherently 'functional', or healthy, fruit — as indicated by the age-old saying 'an apple a day keeps the doctor away'. Presumably this is at least in part because of the content of pectin (a dietary fibre that also reduces cholesterol), antioxidants, minerals, vitamins and other bioactives in apples. So why go any further? The era of functional foods is upon us and consumers are becoming more aware of such foods. Food producers and processors are also facing tighter profit margins and added value is imperative. So, functional apple products may afford new opportunities for both producers and processors. This is why they are one of the research and development (R&D) topics at Ashtown Food Research Centre (AFRC) in Dublin, as part of the EU ISAFRUIT project (a European integrated research project). The R&D at AFRC involves two streams: (i) adding bioactives (food components or dietary supplements, other than those needed to meet basic nutritional needs) to fresh-cut fruit salads with emphasis on apples; and (ii) adding bioactives/functional ingredients to processed apple products. The work will be extended to other tree fruits later in the project.

Mintel data shows that the value of the frozen ready-meals market in the UK has been reduced by the effect of price promotion, while chilled ready-meals continue to be a big rival in the market place. This has caused the main players to diversify into premium and luxury range prepared meals. The developing market for food in central and Eastern Europe may also represent an opportunity for increased sales of these products. Most ready-meals are made up of a combination of carbohydrate (eg rice, potato or pasta), protein (fish or meat), vegetables and sauce. Despite increasing awareness of the health benefits from eating fish, ready-meals containing fish are less common than those containing chicken or beef and the appearance of such fish meals on the market are a relatively recent occurrence.

This paper examines the determinants of self-rated health in the Republic of Ireland using data from the 2001 Quarterly National Household Survey Health Module and the 2005 ESRI Time Usage Survey. Results indicate that self-rated health is a useful proxy for self-reported chronic illness indices. Higher education, having private medical insurance cover and being married is associated with better self-rated health. The strong inverse relationship between age and self-rated health is found to be robust to the inclusion of self-reported morbidity. Caregivers display lower self-rated health, even after controlling for age, marital status and education. We find only minor effects of gender. Understanding further the causal nature of the above associations is a key issue for future research.

Includes abstracts for the following papers: Performance of Different Apple Cultivars in Fresh-Cut Fruit Salad Applications. Ready-Desserts from Apples: selecting/Optimising Cultivars and Processes. Physicochemical and Sensory Properties of Minimally Processed Apple Desserts Containing Creams or Custard. Effect of Dip Concentration and Time on the Efficacy of Natureseal AS1 Browning Inhibitor in Apple Wedges and on AS1 Residues in the Product

A simple random survey was conducted in Ireland during 2005 to estimate the ELISA-prevalence of paratuberculosis, commonly called Johne's disease (JD), in the cattle population. Serum samples were collected from all 20,322 females/breeding bulls over 12 months-of-age in 639 herds. All samples were tested using a commercially available absorbed ELISA. The overall prevalence of infected herds, based on the presence of at least one ELISA-positive animal, was 21.4% (95% CI 18.4%-24.9%). Herd prevalence levels amongst dairy herds (mean 31.5%; 95% CI: 24.6%, 39.3%) was higher than among beef herds (mean 17.9%; 95% CI: 14.6%-21.8%). However, the animal level prevalence was similar. The true prevalence among all animals tested, was calculated to be 2.86% (95%CI: 2.76, 2.97) and for animals >= 2 yrs, it was 3.30% (95%CI: 3.17, 3.43). For animals in beef herds, true prevalence was 3.09% (95%CI: 2.93, 3.24), and for those in dairy herds, 2.74% (95%CI: 2.59, 2.90). The majority of herds had only one ELISA-positive infected animal. Only 6.4% (95% CI 4.7%-8.7%) of all herds had more than one ELISA-positive infected animal; 13.3% (CI 8.7%-19.7%) of dairy herds ranging from two to eight ELISA-positive infected animals; and, 3.9% beef herds (CI 2.4%-6.2%) ranging from two to five ELISA-positive infected animals. The true prevalence of herds infected and shedding Mycobacterium avium subspecies paratuberculosis is estimated to be 9.5% for all herd types; 20.6% for dairy herds; and 7.6% for beef herds. If ELISA positive animals <2-years-of-age are excluded, the true herd prevalene reduces to: 9.3% for all herd types; 19.6% for dairy herds; and 6.3% for beef herds based on a test specificity (Sp) of 99.8% and test sensitivity (Se) (i.e., ability to detect culture-positive, infected animals shedding at any level) of 27.8-28.9%.

This paper discusses the background to real-time GPS asset tracking in the context of 1) monitoring moving vehicles, 2) the content of the GPS data that is provided as part of the 2 systems that were tested, 3) the theory behind the installation of such tracking systems in terms of GPS, GPRS and internet communications and finally, 4) the assessment of the economic benefits of both systems is also discussed. This involved the installation of 2 different GPS asset tracking providers, Bluetree and Fleetmatics onto 2 timber haulage trucks – an articulated Iveco Stralis 530 6*2 tractor unit with tri-axle road friendly air suspension flat bed trailer with a design gross vehicle weight (d.g.v.w.) equal to 44 000kg. The Scania 124 (400) was a rigid (3 axle) + trailer (3 axle) + crane combination with an equivalent d.g.v.w. of 44 000kg.

The GPSTRACK project has arisen as a result of a recommendation in the Forest Industry Transport Group (FITG) Code of Practice for Timber Haulage, which was to 'Encourage closer co-operation between consignors and hauliers to plan routes in a manner which optimizes the economic returns within a legal framework'. The project involved the installation of Bluetree global positioning systems (GPS) asset tracking systems onto two timber haulage trucks: an articulated Iveco Stralis 530 6⋆2 tractor unit with tri-axle road friendly air suspension flatbed trailer with a design gross vehicle weight (dgvw) equal to 44 t and a Scania 124 (400) with a rigid (3 axle) + trailer (3 axle) + crane combination with an equivalent dgvw of 441. This paper discusses the background and use of real-time asset tracking devices in the context of timber haulage in Ireland. Real-time location information is a relatively new concept for Irish applications (less than 5 years), but there is an increasing deployment of the technology into the truck transport sector in Ireland. The goal of this study was to test the accuracy of the recorded GPS locations relative to the underlying travelled route network based on the criteria of: 1) a fixed GPS receiver location, 2) a truck travelling on public routes, and 3) comparing accuracy of public routes to the accuracy of the truck travelling in a more demanding environment such as the internal forest road network. The results analysis calculated the horizontal root mean square (HRMS) 63 percent GPS accuracy of both trucks tracklog on both the public road network and the internal forest road network over a period of 4 weeks which totalled approximately 15,000 GPS data points. The HRMS accuracy values ranged from 2.55 to 2.47 m for the public roads, while the forest road accuracy were approximately 27 m and 41 m for Iveco and Scania, respectively.

The Republic of Ireland, like many other countries is trying to diversify energy sources to counteract environmental, political and social concerns. Bioethanol from domestically grown agricultural crops is an indigenously produced alternative fuel that can potentially go towards meeting the goal of diversified energy supply. The Republic of Ireland’s distribution of existing soils and agricultural land-uses limit arable crop land to around 10% of total agricultural area. Demand for land to produce arable crops is expected to decrease, which could open the opportunity for bioethanol production. Bioethanol production plants are required to be of a sufficient scale in order to compete economically with other fuel sources, it is important therefore to determine if enough land exists around potential ethanol plant locations to meet the potential demands for feedstock. This study determines, through the use of a developed GIS based model, the potential quantities of feedstock that is available in the hinterlands of nine locations in the Republic of Ireland. The results indicate that three locations can meet all its feedstock demands using indigenously grown sugarbeet, while only one location can meet its demands using a combination of indigenous wheat and straw as the two locally sourced feedstocks.

In early December 2008, a global recall of Irish pork was initiated as a result of a subset of the national pork output being contaminated with dioxin. In this study, members of a panel from an internet-based longitudinal monitor of public opinion on food and health, was used to assess public perceptions about the dioxin incident in late December. A larger proportion of respondents reported that that there was a ‘very high’ health risk from pork (8.6 %) than any other food of animal origin. The risk posed to human health from dioxins was considered to be relatively high compared to a broad range of potential food and non-food risks. The majority of respondents (70.5 %) accepted that the way in which the authorities managed the crisis was ‘adequate’ or ‘very efficient’. These findings should be considered in light of the following facts: the European Food Safety Authority and the Irish authorities announced that there was no risk to human health from the dioxins in pork, there was extensive media attention about the dioxin incident, and the Irish Government had to introduce a 200 million euro compensation package for the Irish pork industry which was funded by the Irish taxpayer.

An economic assessment was conducted on five biomass-to-ethanol production pathways utilising the feedstock: wheat, triticale, sugarbeet, miscanthus and straw. The analysis includes the costs and margins for all the stakeholders along the economic chain. This analysis reveals that under current market situations in Ireland, the production of ethanol under the same tax regime as petrol makes it difficult to compete against that fuel, with tax breaks, however, it can compete against petrol. On the other hand, even under favourable tax breaks it will be difficult for indigenously produced ethanol to compete against cheaper sources of imported ethanol. Therefore, the current transport fuel market has no economic reason to consume indigenously produced ethanol made from the indigenously grown feedstock analysed at a price that reflects all the stakeholders’ costs. To deliver a significant penetration of indigenous ethanol into the market would require some form of compulsory inclusion or else considerable financial supports to feedstock and ethanol producers.

This paper investigates, using the GIS platform, the potential impacts of meeting national bioenergy targets using only indigenous sources of feedstock on the habitats and carbon stores that exist within Ireland’s field boundaries. A survey of the Republic of Irelands field was conducted in order to estimate and map the size and geographic distribution of the Republic of Ireland’s field boundaries. The planting and harvesting costs associated with possible bioenergy crop production systems were determined using the relationship between the seasonal operating efficiency and the average field size. The results indicate that Ireland will need a large proportion of its current agricultural area (at least 16.5%) in order to its meet national bioenergy targets by 2020. The demand cannot be met by the current area that both has suitable soil type for growing the bioenergy crops and is large enough for the required operating efficiency. The results of this study indicate that implementing and meeting national bioenergy targets using only indigenous feedstock will likely impact the country’s field boundary resources negatively, as crop producers seek to improve production efficiency through field consolidation and field boundary removal. It was found that such boundary removal results in a loss of up to 6 tC/km2 and 0.7 ha/km of previously permanent habitat where average field size is small. The impact of field consolidation on these resources reduces substantially as larger fields become consolidated.

An economic analysis of a non-woody biomass pelleting process was performed for conditions in the Republic of Ireland. The analysis considered the establishment, harvest, storage and drying costs of the feedstock’s on-farm, together with transportation costs to the processing plant and the costs associated with the pelleting process. Capital and operating costs of the pelleting process were estimated at several plant capacities – 6t / h, 8t / h and 10t / h. The pellet production cost for the base case scenario of 8t / h was 102 / t of pellets produced. By decreasing production capacity to 6t / h an increase in the production cost of 10 / t was experienced while increasing capacity to 10t / h resulted in a decrease of 6 / t in the production cost of pellets. The cost of the raw material is the largest cost component (66%) of the total pellet production cost. Other major cost factors include pelleting and cooling plant (11%), straw grinding plant (10%) and personnel costs (9%). Considering current energy prices the equivalent energy cost of 7 / GJ (excluding profit margins) the potential production of non-woody biomass pellets competes favourably with oil and gas and was found to be economically viable.

The availability of virgin soils and traditional landfill covers are not only costly and increasingly becoming scarce, but they also reduce the storage capacity of landfill. The problem can be overcome by the utilisation of certain suitable waste streams as alternative landfill covers. The objective of this study was to assess the suitability of Construction & Demolition fines (C&D), Commercial & Industrial fines (C&I) and woodchip (WC) as potential landfill cover materials in terms of odour control. Background odour analysis was conducted to determine if any residual odour was emitted from the cover types. It was deemed negligible for the three materials. The odour reduction performance of each of the materials was also examined on an area of an active landfill site. A range of intermediate cover compositions were also studied to assess their performance. Odour emissions were sampled using a Jiang hood and analysed. Results indicate that the 200 mm deep combination layer of C&D and wood chip used on-site is adequate for odour abatement. The application of daily cover was found to result in effective reduction allowing for the background odour of woodchip.

Capsule The Field Boundary Evaluation and Grading System (FBEGS) is a useful predictor of bird populations found in field boundaries located in southeast Ireland. Aims To assess the potential of FBEGS to evaluate the ecological quality of field boundaries in agricultural ecosystems and as a tool for the measurement of bird populations within field boundaries. Methods Surveys of bird populations were made in selected field boundaries on 50 farms in southeast Ireland in winter and during the breeding season. FBEGS surveys were also carried out on field boundaries to assess ecological quality. glms were fitted to assess the utility of the FBEGS Index as a predictor of bird populations. Results The FBEGS Index was an effective predictor of bird populations in the breeding season, but had limited use in predicting bird populations in winter. Within the overall FBEGS Index, the Associated Features score was a good predictor for populations in both the winter and breeding seasons. In addition, the Boundary Structural score of the field boundary was also an accurate predictor of birds in the breeding season. Conclusion The FBEGS Index has high potential for predicting the effect that changes in the farmed landscape will have on bird populations.

The threat of increasing fuel prices and climate change necessitates the need for clean, renewable and independent energy sources. A GIS (Geographical Information Systems) model was developed using ArcGIS 9.2 to analyze the availability of non-woody biomass (wheat, oat, barley and rape straw, willow and miscanthus) for pellet production in Ireland. Utilization within the heating and electricity sector would displace currently used fossil fuels with cleaner, carbon neutral non-woody residues. The aim of the analysis was to determine the total hectares of biomass within Ireland and compute the potential non-woody biomass yield. The greatest potential source of biomass for pelleting is cereal straw. Within the Republic of Ireland the South-East, South-West and Mid-East of Ireland have the greatest biomass yield for pellet production and likely to be most economically viable. Non-woody biomass has a realistic potential to displace fossil fuels within the heating and electricity sector resulting in CO2 mitigation

Cancer cells have a high demand for cysteine as precursor of the antioxidant, glutathione, that is required to promote cell growth and division. Uptake of cystine by the View the MathML source cystine-glutamate exchanger provides the majority of cysteine, but a significant percentage may be derived from methionine, via a transsulfuration pathway. Our aim was to evaluate the relative contribution of the exchanger and the transsulfuration pathway to glutathione synthesis in astrocytoma/glioblastoma cells, using the C6 glioma cell line as a model system. Blockade of the View the MathML source exchanger with the gliotoxins l-αaminoadipate or l-β-N-oxalylamino-l-alanine (400 μM) caused a loss of cellular cysteine and depletion in glutathione to 51% and 54% of control, respectively, after 24 h. Inhibition of the transsulfuration pathway with propargylglycine (1 mM, 24 h) depleted glutathione to 77% of control. Co-incubation of cells with gliotoxin and propargylglycine reduced glutathione to 39% of control at 24 h and to 20% at 48 h. Expression of cystathionine-γ-lyase, the rate-limiting enzyme of the transsulfuration pathway, was significantly increased following incubation of the cells with gliotoxins. Incubation of C6 cells with diethylmaleate for 3 h led to a significant reduction in glutathione (63%), whereas expression of cystathionine-γ-lyase was increased by 1.5-fold. Re-feeding methionine to diethylmaleate-treated cells incubated in the absence of cystine or methionine resulted in a significant recovery in glutathione that was blocked by propargylglycine. Co-incubation of C6 cells with diethylmaleate and the JNK-inhibitor, SP600125, abolished the increase in expression of cystathionine-γ-lyase that had been observed in the presence of diethylmaleate alone. Similar results were obtained with the p38MAPK inhibitor, SB203580. It is concluded that glutathione depletion causes a JNK- and p38MAPK-mediated increase in expression of cystathionine-γ-lyase that promotes flux through the transsulfuration pathway to compensate for loss of glutathione in C6 glioma cells.